Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
RAB40CQ96S21 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 RFPL4AP1-201ENST00000530883 850 ntBASIC11.71□□□□□ -0.53
RAB40CQ96S21 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
RAB40CQ96S21 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 CES1P1-201ENST00000421606 1704 ntBASIC11.71□□□□□ -0.54
RAB40CQ96S21 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 REXO1L1P-201ENST00000379010 6598 ntBASIC11.71□□□□□ -0.54
RAB40CQ96S21 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
RAB40CQ96S21 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 AP000437.1-201ENST00000624057 2085 ntBASIC11.71□□□□□ -0.54
RAB40CQ96S21 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
RAB40CQ96S21 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 Z98257.2-202ENST00000641138 1548 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 C1QBPP1-201ENST00000400117 770 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 ACTBP8-201ENST00000403258 1108 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 BASP1P1-201ENST00000430708 665 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 GNAQP1-201ENST00000444815 1067 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 PUDPP3-201ENST00000445368 636 ntBASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
RAB40CQ96S21 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.7□□□□□ -0.54
RAB40CQ96S21 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms