Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MIR4706-201ENST00000582134 82 ntBASIC13.64□□□□□ -0.23
TM9SF4Q92544 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
TM9SF4Q92544 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TM9SF4Q92544 AL138725.1-201ENST00000407347 1314 ntBASIC13.64□□□□□ -0.23
TM9SF4Q92544 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC009779.1-201ENST00000551138 283 ntBASIC13.63□□□□□ -0.23
TM9SF4Q92544 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PRKXP1-201ENST00000561423 1122 ntBASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC020922.3-201ENST00000595064 547 ntBASIC13.63□□□□□ -0.23
TM9SF4Q92544 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 CICP8-201ENST00000455800 2813 ntBASIC13.63□□□□□ -0.23
TM9SF4Q92544 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TM9SF4Q92544 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TM9SF4Q92544 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ISCA2P1-201ENST00000425548 448 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 TPT1P11-201ENST00000458482 498 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms