Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC027796.2-201ENST00000575326 344 ntBASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AL365181.3-201ENST00000605886 3222 ntBASIC12.53□□□□□ -0.4
CCDC107Q8WV48 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 PCDHB18P-202ENST00000526308 3197 ntBASIC12.53□□□□□ -0.4
CCDC107Q8WV48 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCDC107Q8WV48 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.52□□□□□ -0.4
CCDC107Q8WV48 AC072061.1-201ENST00000569710 2234 ntBASIC12.52□□□□□ -0.41
CCDC107Q8WV48 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.52□□□□□ -0.41
CCDC107Q8WV48 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SALL4P5-201ENST00000419001 1760 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AC010336.1-201ENST00000539278 4739 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AC087499.6-201ENST00000411576 835 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 328.4 ms