Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 HNRNPA1P59-201ENST00000430583 918 ntBASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 GOLGA2P10-201ENST00000550961 817 ntBASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 AC104759.1-201ENST00000559109 939 ntBASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 AL158032.2-201ENST00000616818 195 ntBASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 CA6-205ENST00000480186 1493 ntTSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL22A1Q8NFW1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 KRT8P24-201ENST00000560290 1559 ntBASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 USP39-207ENST00000450066 2086 ntTSL 2 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 FTLP3-201ENST00000427242 528 ntBASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 PLAC9P1-203ENST00000440031 223 ntBASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 RN7SL477P-201ENST00000488440 286 ntBASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC18.27■□□□□ 0.51
COL22A1Q8NFW1 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 STK25-235ENST00000543554 2556 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AL513497.1-201ENST00000624273 2083 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC245140.2-201ENST00000624054 1939 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC012513.2-201ENST00000441511 1137 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 NAA38-204ENST00000575208 529 ntTSL 3 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 FAM223B-202ENST00000598177 713 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 FAM223A-202ENST00000625204 713 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AC011239.2-201ENST00000624820 1489 ntBASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL22A1Q8NFW1 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AC012358.2-201ENST00000430010 1434 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 MIR766-201ENST00000390223 111 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 POLR3DP1-201ENST00000398689 1176 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms