Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 TPM3P8-201ENST00000330554 643 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 TSPY16P-201ENST00000449843 468 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 CICP12-201ENST00000455801 843 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 AL590640.2-201ENST00000457038 527 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MIR5189-201ENST00000577370 114 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 OR10B1P-201ENST00000601666 907 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 AC002472.3-201ENST00000640124 621 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 PEG13-201ENST00000631594 5667 ntBASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.97□□□□□ -0.33
BBS1Q8NFJ9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 MARK2P9-201ENST00000430958 1727 ntBASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.96□□□□□ -0.33
BBS1Q8NFJ9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms