Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 OR2R1P-201ENST00000441404 914 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AL035414.1-201ENST00000451327 857 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 RNA5SP417-201ENST00000516459 108 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 MME-218ENST00000625667 363 ntTSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AL451007.2-201ENST00000632004 563 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CTBP2P8-201ENST00000422584 1330 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AC090502.4-201ENST00000551714 1386 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 PPP1R26P2-201ENST00000611403 3595 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ACTBP7-201ENST00000418351 1124 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 HERC2P11-201ENST00000562845 725 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AC100756.2-201ENST00000569537 736 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AL139339.2-201ENST00000608063 657 ntBASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.06□□□□□ -0.32
RP1L1Q8IWN7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 RN7SKP230-201ENST00000365642 335 ntBASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AL022334.2-201ENST00000610000 484 ntBASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AP002353.1-201ENST00000528257 1599 ntBASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AL606760.3-201ENST00000569869 3591 ntBASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 SERBP1P2-201ENST00000436888 1164 ntBASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.05□□□□□ -0.32
RP1L1Q8IWN7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms