Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 SNRPD2P2-201ENST00000473818 333 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AC009812.1-201ENST00000605948 1059 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13CQ709C8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC11.52□□□□□ -0.56
VPS13CQ709C8 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.56
VPS13CQ709C8 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC11.52□□□□□ -0.56
VPS13CQ709C8 AC005586.2-201ENST00000563946 837 ntBASIC11.52□□□□□ -0.56
VPS13CQ709C8 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13CQ709C8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
VPS13CQ709C8 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
VPS13CQ709C8 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 AC007679.1-201ENST00000458609 502 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 OR52V1P-201ENST00000515557 898 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 AC090505.1-201ENST00000430515 1834 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 HSD3BP1-201ENST00000286193 1111 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 RN7SL672P-201ENST00000474091 317 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 RN7SL480P-201ENST00000581481 294 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 RN7SL832P-201ENST00000607781 1756 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
VPS13CQ709C8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.52□□□□□ -0.57
VPS13CQ709C8 LINC00638-201ENST00000555578 2518 ntBASIC11.52□□□□□ -0.57
VPS13CQ709C8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC113367.3-201ENST00000508316 1912 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC015813.5-201ENST00000624641 1514 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 AC023157.3-201ENST00000619086 2088 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VPS13CQ709C8 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC11.51□□□□□ -0.57
VPS13CQ709C8 CCND3P1-201ENST00000438347 580 ntBASIC11.51□□□□□ -0.57
VPS13CQ709C8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms