Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 AC026271.4-201ENST00000578214 1833 ntBASIC11.19□□□□□ -0.62
KCNIP4Q6PIL6 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GOLGA8CP-201ENST00000446144 5237 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 BX537318.2-201ENST00000624893 4162 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PI4KAP2-201ENST00000360806 2080 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AL359845.1-201ENST00000458202 1648 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 FAM220BP-201ENST00000377689 816 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AL671277.1-201ENST00000429656 993 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ACTG1P14-201ENST00000446382 1122 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 DNAJB3-201ENST00000446806 729 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MIR3687-2-201ENST00000577708 61 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MIR3687-1-201ENST00000614492 61 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AL845472.1-202ENST00000624675 4080 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AL645937.6-201ENST00000641122 3727 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 AC018445.4-201ENST00000624066 2291 ntBASIC11.18□□□□□ -0.62
KCNIP4Q6PIL6 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KCNIP4Q6PIL6 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms