Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 KLF2P2-201ENST00000416807 1039 ntBASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 COX20P2-201ENST00000452636 358 ntBASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC007389.4-201ENST00000454674 793 ntBASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC022616.1-201ENST00000518688 554 ntBASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AL596325.1-201ENST00000563991 1082 ntBASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TMEM53Q6P2H8 KRT8P14-201ENST00000414254 1442 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CU639417.3-201ENST00000624240 1404 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ACTG1P3-201ENST00000431775 1114 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 KRT17P7-201ENST00000451704 1104 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 AC093433.1-201ENST00000458048 571 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 AP005018.1-201ENST00000525475 301 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CLUHP6-201ENST00000580789 941 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 AC010319.3-201ENST00000597028 470 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 AL603764.1-201ENST00000636452 321 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 KRT8P35-201ENST00000483942 1338 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 FAM90A12P-201ENST00000519497 2375 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 FAM90A24P-201ENST00000520792 2369 ntBASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms