Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CDH6P55285 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH6P55285 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 AC021723.1-201ENST00000486306 515 ntBASIC14.96□□□□□ -0.01
CDH6P55285 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH6P55285 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 RN7SL560P-201ENST00000577943 264 ntBASIC14.96□□□□□ -0.01
CDH6P55285 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.96□□□□□ -0.01
CDH6P55285 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH6P55285 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH6P55285 BAP1-211ENST00000615113 489 ntBASIC14.96□□□□□ -0.01
CDH6P55285 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH6P55285 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.96□□□□□ -0.02
CDH6P55285 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH6P55285 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH6P55285 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.95□□□□□ -0.02
CDH6P55285 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH6P55285 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH6P55285 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 AC003686.1-201ENST00000550956 1034 ntBASIC14.95□□□□□ -0.02
CDH6P55285 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
CDH6P55285 AL583810.1-201ENST00000553344 1045 ntBASIC14.95□□□□□ -0.02
CDH6P55285 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH6P55285 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH6P55285 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.95□□□□□ -0.02
CDH6P55285 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH6P55285 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH6P55285 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH6P55285 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms