Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
GPC3P51654 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.81■□□□□ 0.12
GPC3P51654 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC3P51654 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.81■□□□□ 0.12
GPC3P51654 MIR4522-201ENST00000584932 87 ntBASIC15.81■□□□□ 0.12
GPC3P51654 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.81■□□□□ 0.12
GPC3P51654 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
GPC3P51654 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GPC3P51654 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
GPC3P51654 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GPC3P51654 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
GPC3P51654 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 GRK6P1-201ENST00000400595 1711 ntBASIC15.8■□□□□ 0.12
GPC3P51654 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC3P51654 MARK2P16-201ENST00000605714 1723 ntBASIC15.8■□□□□ 0.12
GPC3P51654 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GPC3P51654 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 AC074138.1-201ENST00000611182 1303 ntBASIC15.8■□□□□ 0.12
GPC3P51654 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.8■□□□□ 0.12
GPC3P51654 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.8■□□□□ 0.12
GPC3P51654 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 FTH1P22-201ENST00000456305 520 ntBASIC15.8■□□□□ 0.12
GPC3P51654 RN7SL181P-201ENST00000462921 277 ntBASIC15.8■□□□□ 0.12
GPC3P51654 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC3P51654 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.8■□□□□ 0.12
GPC3P51654 AC005632.3-201ENST00000605544 308 ntBASIC15.8■□□□□ 0.12
GPC3P51654 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.8■□□□□ 0.12
GPC3P51654 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC3P51654 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.8■□□□□ 0.12
GPC3P51654 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.8■□□□□ 0.12
GPC3P51654 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
GPC3P51654 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GPC3P51654 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.79■□□□□ 0.12
GPC3P51654 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GPC3P51654 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GPC3P51654 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC3P51654 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC3P51654 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GPC3P51654 AC016397.2-201ENST00000624848 1985 ntBASIC15.79■□□□□ 0.12
GPC3P51654 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 AP000356.3-201ENST00000382243 753 ntBASIC15.79■□□□□ 0.12
GPC3P51654 AL512430.1-201ENST00000392575 860 ntBASIC15.79■□□□□ 0.12
GPC3P51654 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 OR8T1P-201ENST00000421347 918 ntBASIC15.79■□□□□ 0.12
GPC3P51654 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC3P51654 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC3P51654 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GPC3P51654 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.79■□□□□ 0.12
GPC3P51654 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.79■□□□□ 0.12
GPC3P51654 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms