Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KNTC1P50748 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.59□□□□□ -0.23
KNTC1P50748 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.59□□□□□ -0.23
KNTC1P50748 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KNTC1P50748 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.59□□□□□ -0.23
KNTC1P50748 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 FAM21EP-201ENST00000417804 985 ntBASIC13.59□□□□□ -0.23
KNTC1P50748 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC13.59□□□□□ -0.23
KNTC1P50748 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.59□□□□□ -0.23
KNTC1P50748 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
KNTC1P50748 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KNTC1P50748 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KNTC1P50748 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KNTC1P50748 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KNTC1P50748 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
KNTC1P50748 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
KNTC1P50748 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KNTC1P50748 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KNTC1P50748 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.58□□□□□ -0.24
KNTC1P50748 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.58□□□□□ -0.24
KNTC1P50748 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.58□□□□□ -0.24
KNTC1P50748 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
KNTC1P50748 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
KNTC1P50748 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 AC004554.1-201ENST00000422830 1468 ntBASIC13.58□□□□□ -0.24
KNTC1P50748 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KNTC1P50748 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
KNTC1P50748 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 RN7SL494P-201ENST00000461517 304 ntBASIC13.58□□□□□ -0.24
KNTC1P50748 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC13.58□□□□□ -0.24
KNTC1P50748 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.58□□□□□ -0.24
KNTC1P50748 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.58□□□□□ -0.24
KNTC1P50748 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
KNTC1P50748 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.57□□□□□ -0.24
KNTC1P50748 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KNTC1P50748 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
KNTC1P50748 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.57□□□□□ -0.24
KNTC1P50748 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KNTC1P50748 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms