Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.63□□□□□ -0.23
CLK1P49759 COX5BP8-201ENST00000416911 349 ntBASIC13.63□□□□□ -0.23
CLK1P49759 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.63□□□□□ -0.23
CLK1P49759 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 INE1-201ENST00000456273 945 ntBASIC13.63□□□□□ -0.23
CLK1P49759 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.63□□□□□ -0.23
CLK1P49759 AC005225.4-201ENST00000557330 545 ntBASIC13.63□□□□□ -0.23
CLK1P49759 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 RN7SL48P-201ENST00000579283 293 ntBASIC13.63□□□□□ -0.23
CLK1P49759 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
CLK1P49759 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 LINC02084-201ENST00000606069 1096 ntBASIC13.63□□□□□ -0.23
CLK1P49759 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.63□□□□□ -0.23
CLK1P49759 RPSAP52-203ENST00000622976 1023 ntBASIC13.63□□□□□ -0.23
CLK1P49759 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.63□□□□□ -0.23
CLK1P49759 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLK1P49759 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.63□□□□□ -0.23
CLK1P49759 FAM90A12P-201ENST00000519497 2375 ntBASIC13.63□□□□□ -0.23
CLK1P49759 FAM90A24P-201ENST00000520792 2369 ntBASIC13.63□□□□□ -0.23
CLK1P49759 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
CLK1P49759 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
CLK1P49759 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CLK1P49759 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 EIF3FP3-201ENST00000434851 1086 ntBASIC13.62□□□□□ -0.23
CLK1P49759 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.62□□□□□ -0.23
CLK1P49759 TTTY23B-201ENST00000442790 549 ntBASIC13.62□□□□□ -0.23
CLK1P49759 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 KRT17P7-201ENST00000451704 1104 ntBASIC13.62□□□□□ -0.23
CLK1P49759 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 SLC25A47P1-201ENST00000531577 414 ntBASIC13.62□□□□□ -0.23
CLK1P49759 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.62□□□□□ -0.23
CLK1P49759 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 AL022328.1-201ENST00000610050 478 ntBASIC13.62□□□□□ -0.23
CLK1P49759 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.62□□□□□ -0.23
CLK1P49759 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.62□□□□□ -0.23
CLK1P49759 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.62□□□□□ -0.23
CLK1P49759 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLK1P49759 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms