Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HTTP42858 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC15.46■□□□□ 0.07
HTTP42858 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC15.46■□□□□ 0.07
HTTP42858 MIR5193-201ENST00000584510 109 ntBASIC15.46■□□□□ 0.07
HTTP42858 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.46■□□□□ 0.07
HTTP42858 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HTTP42858 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 POLR3DP1-201ENST00000398689 1176 ntBASIC15.46■□□□□ 0.07
HTTP42858 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC15.46■□□□□ 0.07
HTTP42858 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 PCTP-206ENST00000573500 919 ntTSL 3 BASIC15.46■□□□□ 0.07
HTTP42858 AC008622.3-201ENST00000621170 600 ntBASIC15.46■□□□□ 0.07
HTTP42858 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC15.46■□□□□ 0.07
HTTP42858 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.46■□□□□ 0.07
HTTP42858 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 PRORSD1P-202ENST00000563365 2154 ntBASIC15.46■□□□□ 0.07
HTTP42858 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HTTP42858 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC15.46■□□□□ 0.07
HTTP42858 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HTTP42858 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.46■□□□□ 0.06
HTTP42858 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HTTP42858 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC15.46■□□□□ 0.06
HTTP42858 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.46■□□□□ 0.06
HTTP42858 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.46■□□□□ 0.06
HTTP42858 MIR8071-1-201ENST00000616769 65 ntBASIC15.46■□□□□ 0.06
HTTP42858 MIR8071-2-201ENST00000616772 65 ntBASIC15.46■□□□□ 0.06
HTTP42858 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
HTTP42858 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 TCAF2P1-201ENST00000291129 2421 ntBASIC15.45■□□□□ 0.06
HTTP42858 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 SDCBP2P1-201ENST00000416115 614 ntBASIC15.45■□□□□ 0.06
HTTP42858 ALMS1P1-201ENST00000428767 921 ntBASIC15.45■□□□□ 0.06
HTTP42858 Z84721.1-201ENST00000438841 372 ntBASIC15.45■□□□□ 0.06
HTTP42858 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 AL133453.1-201ENST00000554055 581 ntTSL 3 BASIC15.45■□□□□ 0.06
HTTP42858 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC15.45■□□□□ 0.06
HTTP42858 DLX4-206ENST00000611342 1662 ntBASIC15.45■□□□□ 0.06
HTTP42858 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HTTP42858 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC15.45■□□□□ 0.06
HTTP42858 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.45■□□□□ 0.06
HTTP42858 RPL29P2-202ENST00000498671 657 ntBASIC15.45■□□□□ 0.06
HTTP42858 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC15.45■□□□□ 0.06
HTTP42858 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HTTP42858 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HTTP42858 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.45■□□□□ 0.06
HTTP42858 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HTTP42858 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
HTTP42858 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HTTP42858 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HTTP42858 AC006486.2-201ENST00000624246 2199 ntBASIC15.44■□□□□ 0.06
HTTP42858 RBMXP1-201ENST00000408004 1191 ntBASIC15.44■□□□□ 0.06
HTTP42858 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms