Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.99□□□□□ -0.33
APOBEC1P41238 AP001258.2-201ENST00000529891 490 ntBASIC12.99□□□□□ -0.33
APOBEC1P41238 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.99□□□□□ -0.33
APOBEC1P41238 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC1P41238 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.99□□□□□ -0.33
APOBEC1P41238 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 BEND3P1-201ENST00000421591 1944 ntBASIC12.99□□□□□ -0.33
APOBEC1P41238 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.99□□□□□ -0.33
APOBEC1P41238 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.99□□□□□ -0.33
APOBEC1P41238 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC1P41238 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC1P41238 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APOBEC1P41238 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOBEC1P41238 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.99□□□□□ -0.33
APOBEC1P41238 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.98□□□□□ -0.33
APOBEC1P41238 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
APOBEC1P41238 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 NKAIN1P1-201ENST00000435754 582 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC125604.1-201ENST00000496255 707 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 MIR3188-201ENST00000583494 85 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.98□□□□□ -0.33
APOBEC1P41238 BAP1-211ENST00000615113 489 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 AC138649.2-201ENST00000615886 705 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 AL137784.3-201ENST00000623858 2288 ntBASIC12.98□□□□□ -0.33
APOBEC1P41238 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.98□□□□□ -0.33
APOBEC1P41238 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.98□□□□□ -0.33
APOBEC1P41238 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOBEC1P41238 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.98□□□□□ -0.33
APOBEC1P41238 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
APOBEC1P41238 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms