Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.77■□□□□ 0.12
USP8P40818 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.77■□□□□ 0.12
USP8P40818 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.77■□□□□ 0.12
USP8P40818 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 CICP16-201ENST00000502609 2813 ntBASIC15.77■□□□□ 0.12
USP8P40818 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
USP8P40818 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
USP8P40818 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC15.77■□□□□ 0.12
USP8P40818 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
USP8P40818 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 ARSEP1-201ENST00000420443 635 ntBASIC15.77■□□□□ 0.12
USP8P40818 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.77■□□□□ 0.12
USP8P40818 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.77■□□□□ 0.12
USP8P40818 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 KLF2P4-201ENST00000451959 1225 ntBASIC15.77■□□□□ 0.12
USP8P40818 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.77■□□□□ 0.12
USP8P40818 CTBP2P5-201ENST00000454986 1264 ntBASIC15.77■□□□□ 0.12
USP8P40818 ALG3P1-201ENST00000508806 1114 ntBASIC15.77■□□□□ 0.12
USP8P40818 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.77■□□□□ 0.12
USP8P40818 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.77■□□□□ 0.12
USP8P40818 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.77■□□□□ 0.12
USP8P40818 PPY2P-201ENST00000582808 702 ntBASIC15.77■□□□□ 0.12
USP8P40818 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.77■□□□□ 0.12
USP8P40818 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.77■□□□□ 0.12
USP8P40818 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
USP8P40818 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP8P40818 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
USP8P40818 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP8P40818 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP8P40818 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.77■□□□□ 0.11
USP8P40818 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.77■□□□□ 0.11
USP8P40818 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.77■□□□□ 0.11
USP8P40818 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.11
USP8P40818 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
USP8P40818 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
USP8P40818 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
USP8P40818 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 AC112492.5-201ENST00000421897 457 ntBASIC15.76■□□□□ 0.11
USP8P40818 AC005034.1-201ENST00000426657 489 ntBASIC15.76■□□□□ 0.11
USP8P40818 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.76■□□□□ 0.11
USP8P40818 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 RPL7P3-201ENST00000441388 714 ntBASIC15.76■□□□□ 0.11
USP8P40818 GAPDHP21-201ENST00000450301 1010 ntBASIC15.76■□□□□ 0.11
USP8P40818 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 RAB43P1-201ENST00000561790 589 ntBASIC15.76■□□□□ 0.11
USP8P40818 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.76■□□□□ 0.11
USP8P40818 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 AL358472.3-201ENST00000608147 415 ntBASIC15.76■□□□□ 0.11
USP8P40818 AL136301.1-201ENST00000615830 422 ntBASIC15.76■□□□□ 0.11
USP8P40818 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 SON-203ENST00000381679 7860 ntTSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
USP8P40818 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC15.76■□□□□ 0.11
USP8P40818 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
USP8P40818 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
USP8P40818 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
USP8P40818 HSPA8P5-201ENST00000456928 2069 ntBASIC15.75■□□□□ 0.11
USP8P40818 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms