Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 AC113367.3-201ENST00000508316 1912 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
COL8A2P25067 CAP2P1-201ENST00000557743 1390 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
COL8A2P25067 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
COL8A2P25067 AC097376.2-205ENST00000610159 5334 ntBASIC12.15□□□□□ -0.46
COL8A2P25067 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
COL8A2P25067 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
COL8A2P25067 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 BX640514.1-201ENST00000583223 1918 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 AL161932.2-201ENST00000435436 679 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 FTLP1-201ENST00000449155 526 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 AC140658.4-201ENST00000561990 352 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.14□□□□□ -0.47
COL8A2P25067 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.14□□□□□ -0.47
COL8A2P25067 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.14□□□□□ -0.47
COL8A2P25067 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 AL022334.2-201ENST00000610000 484 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.14□□□□□ -0.47
COL8A2P25067 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
COL8A2P25067 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
COL8A2P25067 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.14□□□□□ -0.47
COL8A2P25067 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
COL8A2P25067 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 KRT18P9-201ENST00000604826 1300 ntBASIC12.13□□□□□ -0.47
COL8A2P25067 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.13□□□□□ -0.47
COL8A2P25067 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
COL8A2P25067 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
COL8A2P25067 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms