Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.76□□□□□ -0.05
ERCC2P18074 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.76□□□□□ -0.05
ERCC2P18074 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.76□□□□□ -0.05
ERCC2P18074 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 KRT18P15-201ENST00000458108 1291 ntBASIC14.76□□□□□ -0.05
ERCC2P18074 TMEM198B-204ENST00000484016 896 ntBASIC14.76□□□□□ -0.05
ERCC2P18074 AC125604.1-201ENST00000496255 707 ntBASIC14.76□□□□□ -0.05
ERCC2P18074 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.76□□□□□ -0.05
ERCC2P18074 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.76□□□□□ -0.05
ERCC2P18074 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.76□□□□□ -0.05
ERCC2P18074 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERCC2P18074 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.76□□□□□ -0.05
ERCC2P18074 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ERCC2P18074 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
ERCC2P18074 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ERCC2P18074 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.75□□□□□ -0.05
ERCC2P18074 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 AC010327.5-201ENST00000586923 3061 ntBASIC14.75□□□□□ -0.05
ERCC2P18074 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ERCC2P18074 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
ERCC2P18074 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.75□□□□□ -0.05
ERCC2P18074 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.75□□□□□ -0.05
ERCC2P18074 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.75□□□□□ -0.05
ERCC2P18074 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.75□□□□□ -0.05
ERCC2P18074 AC243960.2-201ENST00000600996 747 ntBASIC14.75□□□□□ -0.05
ERCC2P18074 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 AC111170.3-201ENST00000624282 2464 ntBASIC14.75□□□□□ -0.05
ERCC2P18074 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ERCC2P18074 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
ERCC2P18074 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms