Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PPP3CBP16298 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13□□□□□ -0.33
PPP3CBP16298 AC013355.1-201ENST00000562625 723 ntBASIC13□□□□□ -0.33
PPP3CBP16298 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13□□□□□ -0.33
PPP3CBP16298 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13□□□□□ -0.33
PPP3CBP16298 MIR4683-201ENST00000579659 81 ntBASIC13□□□□□ -0.33
PPP3CBP16298 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13□□□□□ -0.33
PPP3CBP16298 BNIP3P13-201ENST00000599968 566 ntBASIC13□□□□□ -0.33
PPP3CBP16298 AL162426.1-201ENST00000624141 743 ntBASIC13□□□□□ -0.33
PPP3CBP16298 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13□□□□□ -0.33
PPP3CBP16298 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
PPP3CBP16298 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PPP3CBP16298 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PPP3CBP16298 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.99□□□□□ -0.33
PPP3CBP16298 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC005077.2-201ENST00000449786 690 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC044849.1-201ENST00000519737 1188 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC005730.2-201ENST00000564549 1184 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
PPP3CBP16298 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC009955.4-201ENST00000597192 544 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC106872.11-201ENST00000605838 421 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PPP3CBP16298 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.99□□□□□ -0.33
PPP3CBP16298 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 AC004923.1-202ENST00000642106 209 ntBASIC12.99□□□□□ -0.33
PPP3CBP16298 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
PPP3CBP16298 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
PPP3CBP16298 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.99□□□□□ -0.33
PPP3CBP16298 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PPP3CBP16298 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.99□□□□□ -0.33
PPP3CBP16298 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.98□□□□□ -0.33
PPP3CBP16298 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.98□□□□□ -0.33
PPP3CBP16298 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.98□□□□□ -0.33
PPP3CBP16298 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
PPP3CBP16298 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
PPP3CBP16298 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms