Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB1P01911 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB1P01911 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB1P01911 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AL928921.2-201ENST00000641325 2442 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC099521.3-201ENST00000624251 2938 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AL157407.1-201ENST00000435784 904 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 TUBB8P8-201ENST00000458717 1058 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AL008721.1-201ENST00000609964 604 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC244394.1-201ENST00000435000 1665 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RN7SL832P-201ENST00000607781 1756 ntBASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HLA-DRB1P01911 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 COL6A4P2-202ENST00000504443 2753 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 MIR663B-201ENST00000408361 115 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 POM121L10P-201ENST00000436994 1285 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AL645933.1-201ENST00000440087 609 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 GOLGA2P4-201ENST00000441462 777 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC005586.2-201ENST00000563946 837 ntBASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.6□□□□□ -0.55
HLA-DRB1P01911 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms