Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC011447.5-201ENST00000616168 564 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 AC133540.1-201ENST00000620845 1019 ntBASIC14.36□□□□□ -0.11
NDUFS3O75489 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFS3O75489 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFS3O75489 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFS3O75489 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFS3O75489 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFS3O75489 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 LINC02486-201ENST00000604157 3000 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 MEX3B-202ENST00000558133 4333 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 RPSAP36-202ENST00000494591 1261 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFS3O75489 AL160314.3-201ENST00000556041 767 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFS3O75489 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFS3O75489 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.35□□□□□ -0.11
NDUFS3O75489 AC239800.4-201ENST00000603712 296 ntBASIC14.35□□□□□ -0.11
NDUFS3O75489 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.35□□□□□ -0.11
NDUFS3O75489 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFS3O75489 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFS3O75489 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFS3O75489 KRT8P29-201ENST00000420409 1371 ntBASIC14.34□□□□□ -0.11
NDUFS3O75489 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NDUFS3O75489 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 AC006122.1-201ENST00000493323 440 ntBASIC14.34□□□□□ -0.11
NDUFS3O75489 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFS3O75489 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFS3O75489 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.34□□□□□ -0.11
NDUFS3O75489 AC008805.1-201ENST00000590892 364 ntBASIC14.34□□□□□ -0.11
NDUFS3O75489 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.34□□□□□ -0.11
NDUFS3O75489 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFS3O75489 AL023803.2-201ENST00000620080 638 ntBASIC14.34□□□□□ -0.11
NDUFS3O75489 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFS3O75489 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFS3O75489 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms