Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 KXD1-217ENST00000602094 2738 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 TIAM2-206ENST00000456877 3275 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 MCM7-201ENST00000303887 2957 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 POM121L1P-202ENST00000605258 1835 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC136604.1-201ENST00000418535 575 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 RARRES2P1-201ENST00000474487 481 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC116562.2-201ENST00000507042 360 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC107918.2-201ENST00000530817 355 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC005336.2-201ENST00000593183 939 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AC079602.3-201ENST00000623931 403 ntBASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 HGNC:18790-209ENST00000513555 3291 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 DDX27-206ENST00000618172 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 KCNMB1-201ENST00000274629 5052 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
LINC01558Q9Y6Z2 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 DRAXIN-201ENST00000294485 7346 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 LINC02080-201ENST00000585863 3085 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC7.29□□□□□ -1.24
LINC01558Q9Y6Z2 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms