Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 KRT18P15-201ENST00000458108 1291 ntBASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.57■■□□□ 1.04
RIMBP3Q9UFD9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 HMGA1P1-201ENST00000415560 1062 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 GAPDHP29-201ENST00000429913 985 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 CDCA4P3-201ENST00000442572 689 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 AC022483.2-201ENST00000461464 555 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 AL136084.3-201ENST00000605631 439 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 AIRN-201ENST00000601203 4374 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 MKRN7P-201ENST00000433469 1371 ntBASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.56■■□□□ 1.04
RIMBP3Q9UFD9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 IGHV3-60-201ENST00000521678 354 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 CTBP2P7-201ENST00000593270 1244 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC211476.2-201ENST00000608799 708 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC245140.2-201ENST00000624054 1939 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC113346.2-201ENST00000502684 457 ntTSL 5 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 EEF1DP8-201ENST00000534760 536 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 RN7SL733P-201ENST00000582253 329 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 MIR7847-201ENST00000610912 103 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 RN7SL248P-201ENST00000615117 329 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 RN7SL453P-201ENST00000620275 329 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC117500.5-201ENST00000623233 527 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 AC092471.1-202ENST00000637160 999 ntBASIC21.55■■□□□ 1.04
RIMBP3Q9UFD9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 GPR141-201ENST00000334425 918 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC064836.1-201ENST00000405197 704 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC005822.1-201ENST00000414124 1034 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AP001625.3-201ENST00000416179 449 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 TSEN15P3-201ENST00000422363 367 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AKR1B1P4-201ENST00000426552 922 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC233724.7-201ENST00000511476 253 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC078880.3-201ENST00000603439 1121 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RIMBP3Q9UFD9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms