Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RCC2P1-201ENST00000452257 1476 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AL357563.1-201ENST00000404728 395 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AL021707.6-201ENST00000609212 491 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 AP001065.2-201ENST00000617205 644 ntBASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
KIAA1549Q9HCM3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KIAA1549Q9HCM3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.39
KIAA1549Q9HCM3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
KIAA1549Q9HCM3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 HLA-DMA-203ENST00000395305 777 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AC079112.1-201ENST00000454972 939 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AC026410.1-201ENST00000507366 1101 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 RNA5SP417-201ENST00000516459 108 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AC138701.2-201ENST00000553634 226 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 MIR4750-201ENST00000584564 56 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 GRK6P1-201ENST00000400595 1711 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 AC023794.5-201ENST00000564380 2157 ntBASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KIAA1549Q9HCM3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AC015909.5-201ENST00000624336 2266 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PYY2-201ENST00000315776 282 ntBASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KIAA1549Q9HCM3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms