Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APH1AQ96BI3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 CYP46A4P-201ENST00000414953 267 ntBASIC12.76□□□□□ -0.37
APH1AQ96BI3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.76□□□□□ -0.37
APH1AQ96BI3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 MIR3188-201ENST00000583494 85 ntBASIC12.76□□□□□ -0.37
APH1AQ96BI3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 AL139099.5-201ENST00000635274 300 ntBASIC12.76□□□□□ -0.37
APH1AQ96BI3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APH1AQ96BI3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APH1AQ96BI3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AC239868.1-201ENST00000369385 493 ntBASIC12.75□□□□□ -0.37
APH1AQ96BI3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AC022494.1-201ENST00000466044 728 ntBASIC12.75□□□□□ -0.37
APH1AQ96BI3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APH1AQ96BI3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.75□□□□□ -0.37
APH1AQ96BI3 RN7SL774P-201ENST00000577467 290 ntBASIC12.75□□□□□ -0.37
APH1AQ96BI3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms