Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 RN7SKP175-201ENST00000408472 289 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC087499.6-201ENST00000411576 835 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ARSEP1-201ENST00000420443 635 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AL161932.2-201ENST00000435436 679 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC027237.1-201ENST00000560942 655 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC009486.1-201ENST00000569860 813 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC008494.3-201ENST00000606615 944 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 AP000593.2-201ENST00000542775 1433 ntBASIC13.89□□□□□ -0.19
VPS33AQ96AX1 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 CYMP-203ENST00000474680 1263 ntBASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 WASH4P-201ENST00000564273 1246 ntBASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS33AQ96AX1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS33AQ96AX1 AC083964.2-201ENST00000623988 2396 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms