Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 KLF2P2-201ENST00000416807 1039 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 UGT1A2P-201ENST00000454886 866 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 AC093004.1-201ENST00000508850 424 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 DUX4L47-201ENST00000566374 394 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 RRP7BP-205ENST00000566851 833 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 MIR6074-201ENST00000612054 107 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 PRSS30P-206ENST00000641773 873 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 SALL4P5-201ENST00000419001 1760 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RFT1Q96AA3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 SOCS2P1-201ENST00000417727 557 ntBASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC098850.1-201ENST00000419919 790 ntBASIC12.82□□□□□ -0.36
RFT1Q96AA3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC123567.1-201ENST00000548294 1261 ntBASIC12.82□□□□□ -0.36
RFT1Q96AA3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC124283.3-201ENST00000570869 594 ntBASIC12.82□□□□□ -0.36
RFT1Q96AA3 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 AC093726.1-201ENST00000608064 963 ntBASIC12.82□□□□□ -0.36
RFT1Q96AA3 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFT1Q96AA3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.82□□□□□ -0.36
RFT1Q96AA3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms