Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 AL627422.1-201ENST00000434104 580 ntBASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 AC130709.1-201ENST00000484779 1212 ntBASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 AC114947.1-202ENST00000514136 344 ntBASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP6V0A1Q93050 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CCT8L1P-201ENST00000465400 1674 ntBASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CHCHD2P9-201ENST00000461726 456 ntBASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 NDUFS6P1-201ENST00000485187 316 ntBASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP6V0A1Q93050 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 KRT8P1-201ENST00000557533 1207 ntBASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATP6V0A1Q93050 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms