Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 RPS2P36-201ENST00000456516 831 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC019193.1-201ENST00000506678 823 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC138701.2-201ENST00000553634 226 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC079328.1-201ENST00000560358 952 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC007881.3-201ENST00000608897 607 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 IGHV1-12-201ENST00000518307 205 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 KRT8P2-201ENST00000556193 944 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC005041.3-201ENST00000606287 649 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC242376.2-201ENST00000619355 883 ntBASIC14.31□□□□□ -0.12
CHD5Q8TDI0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 PDXDC2P-206ENST00000534700 1315 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 FAM90A12P-201ENST00000519497 2375 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 FAM90A24P-201ENST00000520792 2369 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 AC091046.1-201ENST00000331871 207 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 FXNP2-201ENST00000411625 547 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 ERP29P1-201ENST00000442902 706 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 LINC02486-201ENST00000604157 3000 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 KRT8P18-201ENST00000413425 1445 ntBASIC14.3□□□□□ -0.12
CHD5Q8TDI0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CHD5Q8TDI0 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms