Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC009779.1-201ENST00000551138 283 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC020914.3-201ENST00000594712 304 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC021016.3-201ENST00000608367 477 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC016397.2-201ENST00000624848 1985 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 AC089987.1-201ENST00000551654 2209 ntBASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LYSMD3Q7Z3D4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AC012497.1-201ENST00000429392 575 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 XBP1P1-201ENST00000436573 652 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 MARK2P5-201ENST00000507649 634 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AL132994.2-201ENST00000603120 687 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 LAP3P2-201ENST00000454686 1454 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 AL022313.4-201ENST00000562756 2046 ntBASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LYSMD3Q7Z3D4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 AHCYP4-201ENST00000419201 1315 ntBASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LYSMD3Q7Z3D4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms