Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
H3F3AP84243 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.86□□□□□ -0.35
H3F3AP84243 KRT18P15-201ENST00000458108 1291 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
H3F3AP84243 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.86□□□□□ -0.35
H3F3AP84243 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.86□□□□□ -0.35
H3F3AP84243 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.86□□□□□ -0.35
H3F3AP84243 AC243960.2-201ENST00000600996 747 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 AC026740.1-201ENST00000607068 791 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 AL157813.1-201ENST00000612996 587 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 AC100757.4-201ENST00000626934 759 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 AC244452.3-201ENST00000636814 210 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
H3F3AP84243 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.86□□□□□ -0.35
H3F3AP84243 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 TUBBP5-203ENST00000508529 1334 ntBASIC12.86□□□□□ -0.35
H3F3AP84243 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.86□□□□□ -0.35
H3F3AP84243 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
H3F3AP84243 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 AC007952.5-201ENST00000572818 1486 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 AC138028.6-201ENST00000616106 1482 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 AL008707.1-201ENST00000422498 534 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 AKR7A2P1-201ENST00000460134 915 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 RCC2P8-201ENST00000502779 1035 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 NAT9-222ENST00000583476 583 ntTSL 3 BASIC12.85□□□□□ -0.35
H3F3AP84243 MIR3188-201ENST00000583494 85 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 AC020914.3-201ENST00000594712 304 ntBASIC12.85□□□□□ -0.35
H3F3AP84243 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H3F3AP84243 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
H3F3AP84243 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H3F3AP84243 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms