Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 C2orf27AP3-201ENST00000434123 579 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AL590640.2-201ENST00000457038 527 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.71□□□□□ -0.37
SEC61A1P61619 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.71□□□□□ -0.37
SEC61A1P61619 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AC025279.2-201ENST00000569730 653 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AL354718.3-201ENST00000616414 581 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 CR382287.1-201ENST00000623954 586 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 AL033527.4-201ENST00000641026 673 ntBASIC12.71□□□□□ -0.37
SEC61A1P61619 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.71□□□□□ -0.37
SEC61A1P61619 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SEC61A1P61619 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
SEC61A1P61619 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SEC61A1P61619 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SEC61A1P61619 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SEC61A1P61619 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SEC61A1P61619 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 AL138709.1-201ENST00000614840 1693 ntBASIC12.7□□□□□ -0.38
SEC61A1P61619 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 FP325330.2-201ENST00000624219 5630 ntBASIC12.7□□□□□ -0.38
SEC61A1P61619 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC61A1P61619 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SEC61A1P61619 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 ACTBP8-201ENST00000403258 1108 ntBASIC12.7□□□□□ -0.38
SEC61A1P61619 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC61A1P61619 FAM197Y7-201ENST00000432892 766 ntBASIC12.7□□□□□ -0.38
SEC61A1P61619 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.7□□□□□ -0.38
SEC61A1P61619 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.7□□□□□ -0.38
SEC61A1P61619 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.7□□□□□ -0.38
SEC61A1P61619 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 AP000812.2-201ENST00000538934 718 ntBASIC12.7□□□□□ -0.38
SEC61A1P61619 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.7□□□□□ -0.38
SEC61A1P61619 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
SEC61A1P61619 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SEC61A1P61619 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SEC61A1P61619 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms