Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.14□□□□□ -0.31
CXCR4P61073 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.14□□□□□ -0.31
CXCR4P61073 AC009955.4-201ENST00000597192 544 ntBASIC13.14□□□□□ -0.31
CXCR4P61073 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CXCR4P61073 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CXCR4P61073 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CXCR4P61073 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CXCR4P61073 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CXCR4P61073 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 SOCS2P1-201ENST00000417727 557 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 AL442647.2-201ENST00000429864 857 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 METTL21AP1-201ENST00000438852 635 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.13□□□□□ -0.31
CXCR4P61073 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.13□□□□□ -0.31
CXCR4P61073 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 MIR8072-201ENST00000614241 80 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.13□□□□□ -0.31
CXCR4P61073 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 AC004899.2-201ENST00000622993 3860 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CXCR4P61073 AC002350.2-201ENST00000623894 1828 ntBASIC13.13□□□□□ -0.31
CXCR4P61073 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CXCR4P61073 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms