Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 BPIFB5P-201ENST00000457066 1099 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 TPT1P6-201ENST00000458298 514 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 OR2A1-AS1-203ENST00000468575 568 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 RN7SL288P-201ENST00000490496 291 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC008026.2-201ENST00000495438 348 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC022447.5-201ENST00000504817 392 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC112694.1-202ENST00000540985 943 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 RN7SL357P-201ENST00000581065 298 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC009884.2-201ENST00000603110 324 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 AL603764.1-201ENST00000636452 321 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 AP000769.1-203ENST00000637245 208 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 AHCYP4-201ENST00000419201 1315 ntBASIC12.04□□□□□ -0.48
RIPPLY3P57055 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RIPPLY3P57055 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RIPPLY3P57055 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 REXO1L1P-202ENST00000608646 1974 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 SHC1P1-201ENST00000425230 1745 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 GPAA1P2-202ENST00000606848 1787 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 MIR339-201ENST00000362153 94 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 SNRPCP15-201ENST00000424055 192 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 PHKG1P2-201ENST00000457537 863 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC090136.2-201ENST00000517809 420 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC087072.1-201ENST00000603727 421 ntBASIC12.03□□□□□ -0.48
RIPPLY3P57055 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.03□□□□□ -0.48
RIPPLY3P57055 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RIPPLY3P57055 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
RIPPLY3P57055 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
RIPPLY3P57055 AC015909.3-201ENST00000572855 1794 ntBASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms