Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.26□□□□□ -0.29
CLDN20P56880 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.26□□□□□ -0.29
CLDN20P56880 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLDN20P56880 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.26□□□□□ -0.29
CLDN20P56880 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLDN20P56880 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 AL354702.1-201ENST00000442006 1960 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 KRT8P29-201ENST00000420409 1371 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.25□□□□□ -0.29
CLDN20P56880 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 AC099548.2-209ENST00000480264 625 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CLDN20P56880 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.25□□□□□ -0.29
CLDN20P56880 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 AC020658.7-201ENST00000624274 2442 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.25□□□□□ -0.29
CLDN20P56880 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 AC016397.2-201ENST00000624848 1985 ntBASIC13.25□□□□□ -0.29
CLDN20P56880 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CLDN20P56880 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CLDN20P56880 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 AC015688.4-201ENST00000580780 1647 ntBASIC13.24□□□□□ -0.29
CLDN20P56880 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CLDN20P56880 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.24□□□□□ -0.29
CLDN20P56880 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.24□□□□□ -0.29
CLDN20P56880 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.24□□□□□ -0.29
CLDN20P56880 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CLDN20P56880 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 AC139712.1-201ENST00000378256 1875 ntBASIC13.24□□□□□ -0.29
CLDN20P56880 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CLDN20P56880 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms