Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC15.8■□□□□ 0.12
PMS1P54277 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 AC068760.1-201ENST00000493579 1953 ntBASIC15.8■□□□□ 0.12
PMS1P54277 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
PMS1P54277 CICP8-201ENST00000455800 2813 ntBASIC15.8■□□□□ 0.12
PMS1P54277 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PMS1P54277 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PMS1P54277 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 RPSAP36-202ENST00000494591 1261 ntBASIC15.79■□□□□ 0.12
PMS1P54277 SCARNA21-201ENST00000517026 139 ntBASIC15.79■□□□□ 0.12
PMS1P54277 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.79■□□□□ 0.12
PMS1P54277 AC009884.2-201ENST00000603110 324 ntBASIC15.79■□□□□ 0.12
PMS1P54277 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PMS1P54277 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 AC099521.3-201ENST00000624251 2938 ntBASIC15.79■□□□□ 0.12
PMS1P54277 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PMS1P54277 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PMS1P54277 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.78■□□□□ 0.12
PMS1P54277 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PMS1P54277 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PMS1P54277 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PMS1P54277 MARK2P9-201ENST00000430958 1727 ntBASIC15.78■□□□□ 0.12
PMS1P54277 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 AC092580.1-201ENST00000433998 658 ntBASIC15.78■□□□□ 0.12
PMS1P54277 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.78■□□□□ 0.12
PMS1P54277 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 AC135782.3-201ENST00000562782 2105 ntBASIC15.78■□□□□ 0.12
PMS1P54277 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.78■□□□□ 0.12
PMS1P54277 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.78■□□□□ 0.12
PMS1P54277 AC133540.1-201ENST00000620845 1019 ntBASIC15.78■□□□□ 0.12
PMS1P54277 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PMS1P54277 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PMS1P54277 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PMS1P54277 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms