Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SLC1A1P43005 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC1A1P43005 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC1A1P43005 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC1A1P43005 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SLC1A1P43005 AC103592.1-201ENST00000394513 664 ntBASIC15.05■□□□□ -0
SLC1A1P43005 AL391647.1-201ENST00000395664 511 ntBASIC15.05■□□□□ -0
SLC1A1P43005 AC026954.1-201ENST00000429771 1293 ntBASIC15.05■□□□□ -0
SLC1A1P43005 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A1P43005 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.05■□□□□ -0
SLC1A1P43005 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 CR383656.12-201ENST00000549567 513 ntBASIC15.05■□□□□ -0
SLC1A1P43005 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 AC100827.2-201ENST00000563214 1194 ntBASIC15.05■□□□□ -0
SLC1A1P43005 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A1P43005 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC1A1P43005 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SLC1A1P43005 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A1P43005 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.05■□□□□ -0
SLC1A1P43005 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.05■□□□□ -0
SLC1A1P43005 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A1P43005 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SLC1A1P43005 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
SLC1A1P43005 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A1P43005 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 PPT1-213ENST00000641319 2388 ntBASIC15.04■□□□□ -0
SLC1A1P43005 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 AC135782.3-201ENST00000562782 2105 ntBASIC15.04■□□□□ -0
SLC1A1P43005 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 AC009474.1-201ENST00000455096 1565 ntBASIC15.04■□□□□ -0
SLC1A1P43005 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC1A1P43005 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 AL590824.1-201ENST00000403828 1349 ntBASIC15.04■□□□□ -0
SLC1A1P43005 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.04■□□□□ -0
SLC1A1P43005 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 KLF2P4-201ENST00000451959 1225 ntBASIC15.04■□□□□ -0
SLC1A1P43005 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
SLC1A1P43005 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.04■□□□□ -0
SLC1A1P43005 AL162426.1-201ENST00000624141 743 ntBASIC15.04■□□□□ -0
SLC1A1P43005 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.04■□□□□ -0
SLC1A1P43005 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.04■□□□□ -0
SLC1A1P43005 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC1A1P43005 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 AC144522.1-201ENST00000625111 1658 ntBASIC15.03■□□□□ -0
SLC1A1P43005 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLC1A1P43005 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A1P43005 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SLC1A1P43005 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms