Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC090505.1-201ENST00000430515 1834 ntBASIC15.8■□□□□ 0.12
USP8P40818 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 AC089987.1-201ENST00000551654 2209 ntBASIC15.79■□□□□ 0.12
USP8P40818 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 AHCYP2-201ENST00000430630 1300 ntBASIC15.79■□□□□ 0.12
USP8P40818 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 AC006001.1-201ENST00000325130 474 ntBASIC15.79■□□□□ 0.12
USP8P40818 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.79■□□□□ 0.12
USP8P40818 AC234783.1-201ENST00000441761 496 ntBASIC15.79■□□□□ 0.12
USP8P40818 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.79■□□□□ 0.12
USP8P40818 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.79■□□□□ 0.12
USP8P40818 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 CR383656.12-201ENST00000549567 513 ntBASIC15.79■□□□□ 0.12
USP8P40818 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
USP8P40818 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.79■□□□□ 0.12
USP8P40818 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.79■□□□□ 0.12
USP8P40818 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 KHSRPP1-201ENST00000427983 1768 ntBASIC15.79■□□□□ 0.12
USP8P40818 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
USP8P40818 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 STRCP1-201ENST00000509801 5328 ntBASIC15.79■□□□□ 0.12
USP8P40818 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
USP8P40818 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.78■□□□□ 0.12
USP8P40818 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.78■□□□□ 0.12
USP8P40818 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.78■□□□□ 0.12
USP8P40818 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 KRT17P8-201ENST00000540749 863 ntBASIC15.78■□□□□ 0.12
USP8P40818 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.78■□□□□ 0.12
USP8P40818 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.78■□□□□ 0.12
USP8P40818 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 RHOXF1P1-202ENST00000635473 501 ntBASIC15.78■□□□□ 0.12
USP8P40818 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
USP8P40818 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
USP8P40818 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.78■□□□□ 0.12
USP8P40818 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms