Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC17.91■□□□□ 0.46
COL15A1P39059 KRT18P15-201ENST00000458108 1291 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.91■□□□□ 0.46
COL15A1P39059 AL512310.5-201ENST00000551999 515 ntBASIC17.91■□□□□ 0.46
COL15A1P39059 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.91■□□□□ 0.46
COL15A1P39059 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.91■□□□□ 0.46
COL15A1P39059 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL15A1P39059 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL15A1P39059 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL15A1P39059 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.9■□□□□ 0.46
COL15A1P39059 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 TUBB8P4-201ENST00000511806 1324 ntBASIC17.9■□□□□ 0.46
COL15A1P39059 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COL15A1P39059 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.9■□□□□ 0.46
COL15A1P39059 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 KRT18P62-201ENST00000446618 1287 ntBASIC17.9■□□□□ 0.46
COL15A1P39059 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.9■□□□□ 0.46
COL15A1P39059 BATF-202ENST00000555504 361 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 RN7SL556P-201ENST00000582856 298 ntBASIC17.9■□□□□ 0.46
COL15A1P39059 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.9■□□□□ 0.46
COL15A1P39059 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.9■□□□□ 0.46
COL15A1P39059 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.9■□□□□ 0.46
COL15A1P39059 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL15A1P39059 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
COL15A1P39059 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.9■□□□□ 0.46
COL15A1P39059 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL15A1P39059 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.89■□□□□ 0.45
COL15A1P39059 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL15A1P39059 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.89■□□□□ 0.45
COL15A1P39059 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL15A1P39059 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL15A1P39059 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
COL15A1P39059 KRT18P4-201ENST00000422599 1288 ntBASIC17.89■□□□□ 0.45
COL15A1P39059 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.89■□□□□ 0.45
COL15A1P39059 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL15A1P39059 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.89■□□□□ 0.45
COL15A1P39059 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COL15A1P39059 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL15A1P39059 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 TBC1D27-202ENST00000424239 1573 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 AC138761.6-201ENST00000583997 1423 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL15A1P39059 AC007191.1-201ENST00000623179 2995 ntBASIC17.88■□□□□ 0.45
COL15A1P39059 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
COL15A1P39059 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms