Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NRADDP-201ENST00000437305 691 ntBASIC18.92■□□□□ 0.62
USP6P35125 VENTXP4-201ENST00000449029 958 ntBASIC18.92■□□□□ 0.62
USP6P35125 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.92■□□□□ 0.62
USP6P35125 AC092896.1-201ENST00000465850 380 ntBASIC18.92■□□□□ 0.62
USP6P35125 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC18.92■□□□□ 0.62
USP6P35125 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.92■□□□□ 0.62
USP6P35125 AC018695.6-201ENST00000614011 534 ntBASIC18.92■□□□□ 0.62
USP6P35125 AC026120.2-201ENST00000617239 309 ntBASIC18.92■□□□□ 0.62
USP6P35125 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
USP6P35125 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.92■□□□□ 0.62
USP6P35125 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.92■□□□□ 0.62
USP6P35125 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
USP6P35125 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USP6P35125 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.92■□□□□ 0.62
USP6P35125 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP6P35125 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.91■□□□□ 0.62
USP6P35125 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC18.91■□□□□ 0.62
USP6P35125 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 AC093462.1-201ENST00000621167 1683 ntBASIC18.91■□□□□ 0.62
USP6P35125 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP6P35125 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.91■□□□□ 0.62
USP6P35125 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USP6P35125 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP6P35125 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
USP6P35125 AF274858.1-201ENST00000406288 372 ntBASIC18.91■□□□□ 0.62
USP6P35125 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 GOLGA6L16P-201ENST00000441780 1299 ntBASIC18.91■□□□□ 0.62
USP6P35125 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC18.91■□□□□ 0.62
USP6P35125 URAHP-205ENST00000610227 398 ntBASIC18.91■□□□□ 0.62
USP6P35125 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP6P35125 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USP6P35125 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 AC089987.1-201ENST00000551654 2209 ntBASIC18.9■□□□□ 0.62
USP6P35125 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 RHOC-205ENST00000369636 786 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 AC092810.2-201ENST00000431570 362 ntBASIC18.9■□□□□ 0.62
USP6P35125 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC18.9■□□□□ 0.62
USP6P35125 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC18.9■□□□□ 0.62
USP6P35125 IGHEP2-201ENST00000519308 1256 ntBASIC18.9■□□□□ 0.62
USP6P35125 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.9■□□□□ 0.62
USP6P35125 CASP16P-204ENST00000635032 809 ntBASIC18.9■□□□□ 0.62
USP6P35125 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP6P35125 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
USP6P35125 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC18.89■□□□□ 0.62
USP6P35125 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
USP6P35125 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.89■□□□□ 0.61
USP6P35125 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USP6P35125 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USP6P35125 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms