Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.29□□□□□ -0.12
VARSP26640 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.29□□□□□ -0.12
VARSP26640 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 MIR3615-201ENST00000581999 87 ntBASIC14.29□□□□□ -0.12
VARSP26640 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 AC079791.1-201ENST00000605356 973 ntBASIC14.29□□□□□ -0.12
VARSP26640 AC106872.11-201ENST00000605838 421 ntBASIC14.29□□□□□ -0.12
VARSP26640 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.29□□□□□ -0.12
VARSP26640 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
VARSP26640 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.29□□□□□ -0.12
VARSP26640 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 AC006001.1-201ENST00000325130 474 ntBASIC14.28□□□□□ -0.12
VARSP26640 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 ELK2AP-201ENST00000392510 1007 ntBASIC14.28□□□□□ -0.12
VARSP26640 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.28□□□□□ -0.12
VARSP26640 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 COX5BP1-201ENST00000507622 393 ntBASIC14.28□□□□□ -0.12
VARSP26640 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 AC131902.2-201ENST00000566892 2172 ntBASIC14.28□□□□□ -0.12
VARSP26640 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.28□□□□□ -0.12
VARSP26640 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VARSP26640 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 AC244452.3-201ENST00000636814 210 ntBASIC14.28□□□□□ -0.12
VARSP26640 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
VARSP26640 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.28□□□□□ -0.12
VARSP26640 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VARSP26640 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VARSP26640 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
VARSP26640 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VARSP26640 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
VARSP26640 AC012617.1-204ENST00000586340 2305 ntBASIC14.27□□□□□ -0.12
VARSP26640 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms