Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PTX3P26022 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.83□□□□□ -0.2
PTX3P26022 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PTX3P26022 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PTX3P26022 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.82□□□□□ -0.2
PTX3P26022 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 AC089987.1-201ENST00000551654 2209 ntBASIC13.82□□□□□ -0.2
PTX3P26022 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 BTBD6P1-201ENST00000412176 1267 ntBASIC13.82□□□□□ -0.2
PTX3P26022 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.82□□□□□ -0.2
PTX3P26022 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 HSPB1P2-201ENST00000448722 546 ntBASIC13.82□□□□□ -0.2
PTX3P26022 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 RPSAP36-202ENST00000494591 1261 ntBASIC13.82□□□□□ -0.2
PTX3P26022 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.82□□□□□ -0.2
PTX3P26022 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
PTX3P26022 RN7SL560P-201ENST00000577943 264 ntBASIC13.82□□□□□ -0.2
PTX3P26022 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.82□□□□□ -0.2
PTX3P26022 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 AC133540.1-201ENST00000620845 1019 ntBASIC13.82□□□□□ -0.2
PTX3P26022 AL591471.1-201ENST00000621855 229 ntBASIC13.82□□□□□ -0.2
PTX3P26022 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 PEG13-201ENST00000631594 5667 ntBASIC13.82□□□□□ -0.2
PTX3P26022 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PTX3P26022 KRT8P29-201ENST00000420409 1371 ntBASIC13.82□□□□□ -0.2
PTX3P26022 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PTX3P26022 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.82□□□□□ -0.2
PTX3P26022 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.81□□□□□ -0.2
PTX3P26022 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PTX3P26022 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.81□□□□□ -0.2
PTX3P26022 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PTX3P26022 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTX3P26022 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTX3P26022 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PTX3P26022 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PTX3P26022 ATP5G2P4-201ENST00000442175 420 ntBASIC13.81□□□□□ -0.2
PTX3P26022 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PTX3P26022 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.81□□□□□ -0.2
PTX3P26022 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms