Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 AC092552.1-201ENST00000547243 906 ntBASIC15.94■□□□□ 0.14
TPM1P09493 AC027237.1-201ENST00000560942 655 ntBASIC15.94■□□□□ 0.14
TPM1P09493 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM1P09493 KRT18P8-201ENST00000581937 1246 ntBASIC15.94■□□□□ 0.14
TPM1P09493 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.94■□□□□ 0.14
TPM1P09493 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 SLC7A15P-201ENST00000424028 1363 ntBASIC15.94■□□□□ 0.14
TPM1P09493 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 AL590440.2-201ENST00000641973 1595 ntBASIC15.94■□□□□ 0.14
TPM1P09493 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM1P09493 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 MAPK10-262ENST00000641051 5738 ntBASIC15.94■□□□□ 0.14
TPM1P09493 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM1P09493 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM1P09493 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM1P09493 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM1P09493 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TPM1P09493 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM1P09493 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.93■□□□□ 0.14
TPM1P09493 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TPM1P09493 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.93■□□□□ 0.14
TPM1P09493 PUDPP3-201ENST00000445368 636 ntBASIC15.93■□□□□ 0.14
TPM1P09493 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 MESTP3-201ENST00000503460 968 ntBASIC15.93■□□□□ 0.14
TPM1P09493 ALG3P1-201ENST00000508806 1114 ntBASIC15.93■□□□□ 0.14
TPM1P09493 AC005586.2-201ENST00000563946 837 ntBASIC15.93■□□□□ 0.14
TPM1P09493 AP001063.1-201ENST00000568332 529 ntBASIC15.93■□□□□ 0.14
TPM1P09493 MIR8072-201ENST00000614241 80 ntBASIC15.93■□□□□ 0.14
TPM1P09493 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM1P09493 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM1P09493 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM1P09493 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 BASP1P1-201ENST00000430708 665 ntBASIC15.92■□□□□ 0.14
TPM1P09493 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM1P09493 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.92■□□□□ 0.14
TPM1P09493 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
TPM1P09493 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.92■□□□□ 0.14
TPM1P09493 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM1P09493 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.92■□□□□ 0.14
TPM1P09493 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms