Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 CICP17-201ENST00000418553 2377 ntBASIC14.89□□□□□ -0.03
CD48P09326 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CD48P09326 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CD48P09326 AC004899.1-201ENST00000424687 1714 ntBASIC14.89□□□□□ -0.03
CD48P09326 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.89□□□□□ -0.03
CD48P09326 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CD48P09326 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 BTBD6P1-201ENST00000412176 1267 ntBASIC14.88□□□□□ -0.03
CD48P09326 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 AC092580.1-201ENST00000433998 658 ntBASIC14.88□□□□□ -0.03
CD48P09326 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 HLA-J-204ENST00000495278 958 ntBASIC14.88□□□□□ -0.03
CD48P09326 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.88□□□□□ -0.03
CD48P09326 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 BNIP3P13-201ENST00000599968 566 ntBASIC14.88□□□□□ -0.03
CD48P09326 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.88□□□□□ -0.03
CD48P09326 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.88□□□□□ -0.03
CD48P09326 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
CD48P09326 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CD48P09326 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 AP002353.1-201ENST00000528257 1599 ntBASIC14.87□□□□□ -0.03
CD48P09326 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 AL591846.1-201ENST00000451736 433 ntBASIC14.87□□□□□ -0.03
CD48P09326 TUBB8P8-201ENST00000458717 1058 ntBASIC14.87□□□□□ -0.03
CD48P09326 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD48P09326 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.87□□□□□ -0.03
CD48P09326 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD48P09326 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.87□□□□□ -0.03
CD48P09326 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.87□□□□□ -0.03
CD48P09326 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms