Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SFTPBP07988 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SFTPBP07988 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SFTPBP07988 AL138725.1-201ENST00000407347 1314 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 MRPL37P1-201ENST00000592451 1337 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SFTPBP07988 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 AC090505.1-201ENST00000430515 1834 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.62□□□□□ -0.39
SFTPBP07988 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 AC016397.2-201ENST00000624848 1985 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.62□□□□□ -0.39
SFTPBP07988 RN7SKP230-201ENST00000365642 335 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.62□□□□□ -0.39
SFTPBP07988 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.62□□□□□ -0.39
SFTPBP07988 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.62□□□□□ -0.39
SFTPBP07988 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.62□□□□□ -0.39
SFTPBP07988 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SFTPBP07988 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SFTPBP07988 PPT1-213ENST00000641319 2388 ntBASIC12.62□□□□□ -0.39
SFTPBP07988 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SFTPBP07988 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SFTPBP07988 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.61□□□□□ -0.39
SFTPBP07988 RN7SL832P-201ENST00000607781 1756 ntBASIC12.61□□□□□ -0.39
SFTPBP07988 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.61□□□□□ -0.39
SFTPBP07988 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SFTPBP07988 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms