Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.24□□□□□ -0.45
CD3DP04234 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.24□□□□□ -0.45
CD3DP04234 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.24□□□□□ -0.45
CD3DP04234 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CD3DP04234 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 AC010970.1-201ENST00000445125 1848 ntBASIC12.24□□□□□ -0.45
CD3DP04234 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CD3DP04234 DNAJB3-201ENST00000446806 729 ntBASIC12.24□□□□□ -0.45
CD3DP04234 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.24□□□□□ -0.45
CD3DP04234 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 RN7SL399P-201ENST00000471648 279 ntBASIC12.24□□□□□ -0.45
CD3DP04234 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.24□□□□□ -0.45
CD3DP04234 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.24□□□□□ -0.45
CD3DP04234 AC027237.1-201ENST00000560942 655 ntBASIC12.24□□□□□ -0.45
CD3DP04234 AC005586.2-201ENST00000563946 837 ntBASIC12.24□□□□□ -0.45
CD3DP04234 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.24□□□□□ -0.45
CD3DP04234 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.24□□□□□ -0.45
CD3DP04234 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD3DP04234 SRD5A3P1-201ENST00000603021 949 ntBASIC12.24□□□□□ -0.45
CD3DP04234 BX088702.1-201ENST00000610784 235 ntBASIC12.24□□□□□ -0.45
CD3DP04234 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
CD3DP04234 Z98257.2-202ENST00000641138 1548 ntBASIC12.24□□□□□ -0.45
CD3DP04234 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.24□□□□□ -0.45
CD3DP04234 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD3DP04234 AL645937.6-201ENST00000641122 3727 ntBASIC12.24□□□□□ -0.45
CD3DP04234 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD3DP04234 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.24□□□□□ -0.45
CD3DP04234 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 AC092053.3-201ENST00000641308 4975 ntBASIC12.23□□□□□ -0.45
CD3DP04234 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 BTBD7P1-201ENST00000447253 1453 ntBASIC12.23□□□□□ -0.45
CD3DP04234 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.23□□□□□ -0.45
CD3DP04234 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 SPDYE18-201ENST00000510091 1050 ntBASIC12.23□□□□□ -0.45
CD3DP04234 AC069120.2-201ENST00000524091 540 ntBASIC12.23□□□□□ -0.45
CD3DP04234 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.23□□□□□ -0.45
CD3DP04234 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 AC138696.2-201ENST00000607376 223 ntBASIC12.23□□□□□ -0.45
CD3DP04234 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.23□□□□□ -0.45
CD3DP04234 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 AP003969.2-201ENST00000623739 2275 ntBASIC12.23□□□□□ -0.45
CD3DP04234 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD3DP04234 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.23□□□□□ -0.45
CD3DP04234 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.23□□□□□ -0.45
CD3DP04234 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD3DP04234 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD3DP04234 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.22□□□□□ -0.45
CD3DP04234 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD3DP04234 PDIA3P1-201ENST00000471856 1510 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms