Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SPTA1P02549 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.98□□□□□ -0.33
SPTA1P02549 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC12.98□□□□□ -0.33
SPTA1P02549 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.98□□□□□ -0.33
SPTA1P02549 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 OR2I1P-210ENST00000642037 4691 ntBASIC12.98□□□□□ -0.33
SPTA1P02549 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.98□□□□□ -0.33
SPTA1P02549 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 NQO2-204ENST00000380454 851 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTA1P02549 MIR2278-201ENST00000516344 96 ntBASIC12.98□□□□□ -0.33
SPTA1P02549 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
SPTA1P02549 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC12.98□□□□□ -0.33
SPTA1P02549 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SPTA1P02549 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTA1P02549 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTA1P02549 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 AL136172.1-201ENST00000598590 1394 ntBASIC12.97□□□□□ -0.33
SPTA1P02549 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SPTA1P02549 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 AC092570.1-201ENST00000414446 469 ntBASIC12.97□□□□□ -0.33
SPTA1P02549 FAM21EP-201ENST00000417804 985 ntBASIC12.97□□□□□ -0.33
SPTA1P02549 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTA1P02549 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTA1P02549 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTA1P02549 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTA1P02549 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTA1P02549 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTA1P02549 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms