Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 RPL29P2-202ENST00000498671 657 ntBASIC6.17□□□□□ -1.42
USH2AO75445 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 AC008620.2-201ENST00000510294 1569 ntBASIC6.17□□□□□ -1.42
USH2AO75445 MTHFR-217ENST00000641820 1569 ntBASIC6.17□□□□□ -1.42
USH2AO75445 COCH-203ENST00000460581 2688 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
USH2AO75445 AC004884.1-201ENST00000393647 319 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 RPL29P2-201ENST00000488409 460 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AL158032.2-201ENST00000616818 195 ntBASIC6.17□□□□□ -1.42
USH2AO75445 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 AL139424.2-202ENST00000641335 1369 ntBASIC6.17□□□□□ -1.42
USH2AO75445 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 ACE-203ENST00000413513 2237 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USH2AO75445 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
USH2AO75445 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 TPI1P3-201ENST00000335020 740 ntBASIC6.17□□□□□ -1.42
USH2AO75445 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 ACTBP14-201ENST00000411655 1089 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AC074019.1-201ENST00000428788 1096 ntBASIC6.17□□□□□ -1.42
USH2AO75445 RN7SL646P-201ENST00000492969 297 ntBASIC6.17□□□□□ -1.42
USH2AO75445 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC6.17□□□□□ -1.42
USH2AO75445 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC6.17□□□□□ -1.42
USH2AO75445 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FAM90A27P-201ENST00000593323 1370 ntBASIC6.17□□□□□ -1.42
USH2AO75445 FAM90A28P-202ENST00000597191 1374 ntBASIC6.17□□□□□ -1.42
USH2AO75445 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USH2AO75445 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
USH2AO75445 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC6.16□□□□□ -1.42
USH2AO75445 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC6.16□□□□□ -1.42
USH2AO75445 AP000346.1-201ENST00000390329 1087 ntTSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 IL6RP1-201ENST00000417848 1273 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC6.16□□□□□ -1.42
USH2AO75445 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC6.16□□□□□ -1.42
USH2AO75445 AC093700.1-201ENST00000503348 717 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC010442.2-201ENST00000509301 407 ntBASIC6.16□□□□□ -1.42
USH2AO75445 IGHV3OR16-11-201ENST00000565524 349 ntBASIC6.16□□□□□ -1.42
USH2AO75445 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC6.16□□□□□ -1.42
USH2AO75445 AC136475.9-201ENST00000605240 497 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AL109954.3-201ENST00000615088 558 ntBASIC6.16□□□□□ -1.42
USH2AO75445 AC026120.2-201ENST00000617239 309 ntBASIC6.16□□□□□ -1.42
USH2AO75445 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
USH2AO75445 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USH2AO75445 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
USH2AO75445 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms