Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 HMGA1P1-201ENST00000415560 1062 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 DUTP3-201ENST00000450025 415 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.88□□□□□ -0.35
ZIC3O60481 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.88□□□□□ -0.35
ZIC3O60481 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.88□□□□□ -0.35
ZIC3O60481 RHOQP1-201ENST00000555758 579 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.88□□□□□ -0.35
ZIC3O60481 MIR3677-201ENST00000578964 60 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.88□□□□□ -0.35
ZIC3O60481 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.88□□□□□ -0.35
ZIC3O60481 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 SIGLEC18P-201ENST00000602271 909 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
ZIC3O60481 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.88□□□□□ -0.35
ZIC3O60481 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 AC090643.2-201ENST00000623442 2029 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 AC067931.2-201ENST00000623655 2003 ntBASIC12.88□□□□□ -0.35
ZIC3O60481 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZIC3O60481 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZIC3O60481 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.88□□□□□ -0.35
ZIC3O60481 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 OR2I1P-209ENST00000641730 5365 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ZIC3O60481 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 MIR557-201ENST00000385239 98 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ZIC3O60481 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 AC073869.2-201ENST00000417338 1026 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.87□□□□□ -0.35
ZIC3O60481 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.87□□□□□ -0.35
ZIC3O60481 AP000358.1-201ENST00000456260 156 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.87□□□□□ -0.35
ZIC3O60481 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.87□□□□□ -0.35
ZIC3O60481 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.87□□□□□ -0.35
ZIC3O60481 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 AL606495.2-201ENST00000605867 535 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 AC009560.1-201ENST00000620208 434 ntBASIC12.87□□□□□ -0.35
ZIC3O60481 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ZIC3O60481 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.87□□□□□ -0.35
ZIC3O60481 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZIC3O60481 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms