Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.79□□□□□ -0.52
SSSCA1O60232 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 AL589987.1-201ENST00000453380 819 ntBASIC11.79□□□□□ -0.52
SSSCA1O60232 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.79□□□□□ -0.52
SSSCA1O60232 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AC069120.2-201ENST00000524091 540 ntBASIC11.79□□□□□ -0.52
SSSCA1O60232 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.79□□□□□ -0.52
SSSCA1O60232 VPS29-207ENST00000549970 818 ntTSL 3 BASIC11.79□□□□□ -0.52
SSSCA1O60232 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.79□□□□□ -0.52
SSSCA1O60232 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.79□□□□□ -0.52
SSSCA1O60232 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 BAP1-211ENST00000615113 489 ntBASIC11.79□□□□□ -0.52
SSSCA1O60232 HOTTIP_1.1-201ENST00000620415 57 ntBASIC11.79□□□□□ -0.52
SSSCA1O60232 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.79□□□□□ -0.52
SSSCA1O60232 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SSSCA1O60232 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SSSCA1O60232 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
SSSCA1O60232 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC11.78□□□□□ -0.52
SSSCA1O60232 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 MARK2P9-201ENST00000430958 1727 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 GOLGA8EP-201ENST00000530246 1959 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SSSCA1O60232 KLF2P2-201ENST00000416807 1039 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.78□□□□□ -0.52
SSSCA1O60232 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.78□□□□□ -0.52
SSSCA1O60232 CNN2P2-201ENST00000443536 909 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.78□□□□□ -0.52
SSSCA1O60232 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.78□□□□□ -0.52
SSSCA1O60232 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
SSSCA1O60232 AC114812.1-204ENST00000449669 728 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 CNN2P3-201ENST00000450201 906 ntBASIC11.78□□□□□ -0.52
SSSCA1O60232 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.78□□□□□ -0.52
SSSCA1O60232 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms